Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Swoo_2190TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: sse:Ssed_2416 PTS system, glucose subfamily, IIA subunit. (169 aa)    
Predicted Functional Partners:
Swoo_2191
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
 0.999
Swoo_2192
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: sse:Ssed_2414 phosphocarrier, HPr family.
 
 0.999
Swoo_3287
PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: sse:Ssed_3167 PTS system, glucose-like IIB subunint.
 0.999
Swoo_1313
KEGG: sse:Ssed_1213 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
 
  
 0.955
Swoo_1228
PTSINtr with GAF domain, PtsP; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: sse:Ssed_1133 PTSINtr with GAF domain, PtsP; Belongs to the PEP-utilizing enzyme family.
 
   
 0.939
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: sse:Ssed_1184 glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.928
Swoo_1915
PFAM: Aldose 1-epimerase; KEGG: sse:Ssed_2697 aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
  
  
  0.912
Swoo_2275
TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: sse:Ssed_2332 hypothetical protein.
    
  0.911
Swoo_0562
PFAM: ROK family protein; KEGG: bfr:BF1751 ROK family transcriptional repressor.
  
 
 0.909
anmK
Protein of unknown function UPF0075; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
     
 0.903
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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