Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Swoo_2201Glucan 1,4-alpha-glucosidase; PFAM: glycoside hydrolase 15-related; Glucodextranase N; KEGG: slo:Shew_1873 glucan 1,4-alpha-glucosidase. (840 aa)    
Predicted Functional Partners:
Swoo_2210
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sfr:Sfri_1788 alpha amylase, catalytic region.
    
 0.913
Swoo_3416
Alpha amylase catalytic region; PFAM: glycoside hydrolase starch-binding; cell surface receptor IPT/TIG domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; KEGG: spb:M28_Spy1046 alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
    
 0.913
Swoo_2202
PFAM: major facilitator superfamily MFS_1; KEGG: shn:Shewana3_1925 major facilitator superfamily MFS_1.
 
  
 0.767
Swoo_1306
PFAM: tryptophan halogenase; KEGG: sdn:Sden_2707 tryptophan halogenase.
 
     0.624
Swoo_2208
PFAM: tryptophan halogenase; KEGG: sfr:Sfri_1786 tryptophan halogenase.
 
     0.615
Swoo_1140
Tryptophan halogenase; PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: sbl:Sbal_1121 tryptophan halogenase.
 
     0.608
Swoo_1305
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sdn:Sden_2708 TonB-dependent receptor.
  
     0.569
Swoo_3837
PFAM: tryptophan halogenase; KEGG: cps:CPS_0239 putative tryptophan halogenase.
 
     0.568
Swoo_4589
PFAM: TPR repeat-containing protein; KEGG: sbl:Sbal_0349 tetratricopeptide TPR_2 repeat protein.
  
     0.557
Swoo_3938
PFAM: tryptophan halogenase; KEGG: ccr:CC_0971 tryptophan halogenase, putative.
 
     0.554
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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