Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Swoo_2269 | Swoo_2270 | Swoo_2269 | Swoo_2270 | KEGG: sse:Ssed_2338 hypothetical protein. | Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.419 |
| Swoo_2269 | Swoo_4191 | Swoo_2269 | Swoo_4191 | KEGG: sse:Ssed_2338 hypothetical protein. | PFAM: protein of unknown function UPF0227; KEGG: sse:Ssed_0778 protein of unknown function UPF0227. | 0.465 |
| Swoo_2269 | cyaY | Swoo_2269 | Swoo_0485 | KEGG: sse:Ssed_2338 hypothetical protein. | Iron donor protein CyaY; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis. | 0.455 |
| Swoo_2269 | efp | Swoo_2269 | Swoo_2268 | KEGG: sse:Ssed_2338 hypothetical protein. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.990 |
| Swoo_2269 | thiL | Swoo_2269 | Swoo_1387 | KEGG: sse:Ssed_2338 hypothetical protein. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.406 |
| Swoo_2270 | Swoo_2269 | Swoo_2270 | Swoo_2269 | Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | KEGG: sse:Ssed_2338 hypothetical protein. | 0.419 |
| Swoo_4191 | Swoo_2269 | Swoo_4191 | Swoo_2269 | PFAM: protein of unknown function UPF0227; KEGG: sse:Ssed_0778 protein of unknown function UPF0227. | KEGG: sse:Ssed_2338 hypothetical protein. | 0.465 |
| cyaY | Swoo_2269 | Swoo_0485 | Swoo_2269 | Iron donor protein CyaY; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis. | KEGG: sse:Ssed_2338 hypothetical protein. | 0.455 |
| efp | Swoo_2269 | Swoo_2268 | Swoo_2269 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | KEGG: sse:Ssed_2338 hypothetical protein. | 0.990 |
| thiL | Swoo_2269 | Swoo_1387 | Swoo_2269 | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | KEGG: sse:Ssed_2338 hypothetical protein. | 0.406 |