Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Swoo_2746TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sse:Ssed_1840 HAD-superfamily hydrolase, subfamily IIA. (248 aa)    
Predicted Functional Partners:
cmk
KEGG: sse:Ssed_2299 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region.
  
 
  0.935
Swoo_2265
Metal dependent phosphohydrolase; Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates.
  
 
 0.926
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
    
  0.926
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
 
  
  0.925
purH
KEGG: spl:Spea_0432 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region.
    
  0.921
Swoo_1799
Inosine kinase; PFAM: PfkB domain protein; KEGG: sse:Ssed_2845 inosine kinase.
 
  
  0.916
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.
  
  
  0.916
Swoo_2264
KEGG: sse:Ssed_2346 hypothetical protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; Belongs to the dGTPase family. Type 2 subfamily.
   
 
  0.914
rihA
Purine nucleosidase; Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively.
    
 0.912
Swoo_1539
PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sse:Ssed_1427 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
  
 
 0.911
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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