STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swoo_2759PFAM: CBS domain containing protein; KEGG: sse:Ssed_1829 putative signal transduction protein with CBS domains. (134 aa)    
Predicted Functional Partners:
Swoo_2760
KEGG: sse:Ssed_1828 putative nitrogen regulatory protein P-II.
 
    0.960
Swoo_2761
PFAM: protein of unknown function DUF1538; KEGG: sse:Ssed_1827 protein of unknown function DUF1538.
 
     0.905
Swoo_2762
PFAM: protein of unknown function DUF1538; KEGG: sse:Ssed_1826 protein of unknown function DUF1538.
 
     0.903
Swoo_2716
Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.
  
  
 0.551
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.489
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.