Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swoo_2898Arylesterase; PFAM: lipolytic protein G-D-S-L family; KEGG: sse:Ssed_1696 arylesterase. (190 aa)    
Predicted Functional Partners:
Swoo_2896
PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_1698 protein of unknown function DUF214.
 
 
   0.963
Swoo_3734
PFAM: lipolytic protein G-D-S-L family; KEGG: sse:Ssed_3558 lipolytic enzyme, G-D-S-L.
  
  
 
0.925
Swoo_2897
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_1697 ABC transporter related.
 
 
   0.913
Swoo_2046
PFAM: thioesterase superfamily protein; KEGG: slo:Shew_1607 thioesterase superfamily protein.
     
 0.569
Swoo_2899
KEGG: sse:Ssed_1695 hypothetical protein.
       0.435
Swoo_0941
KEGG: sfr:Sfri_2048 L-sorbosone dehydrogenase, putative.
  
     0.407
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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