Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Swoo_3051 | Swoo_3052 | Swoo_3051 | Swoo_3052 | PFAM: response regulator receiver; KEGG: bte:BTH_II0155 chemotaxis response regulator. | PFAM: Patatin; KEGG: sse:Ssed_1595 patatin. | 0.458 |
| Swoo_3052 | Swoo_3051 | Swoo_3052 | Swoo_3051 | PFAM: Patatin; KEGG: sse:Ssed_1595 patatin. | PFAM: response regulator receiver; KEGG: bte:BTH_II0155 chemotaxis response regulator. | 0.458 |
| Swoo_3052 | Swoo_3053 | Swoo_3052 | Swoo_3053 | PFAM: Patatin; KEGG: sse:Ssed_1595 patatin. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_1594 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | 0.518 |
| Swoo_3052 | hfq | Swoo_3052 | Swoo_4170 | PFAM: Patatin; KEGG: sse:Ssed_1595 patatin. | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.400 |
| Swoo_3053 | Swoo_3052 | Swoo_3053 | Swoo_3052 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_1594 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | PFAM: Patatin; KEGG: sse:Ssed_1595 patatin. | 0.518 |
| hfq | Swoo_3052 | Swoo_4170 | Swoo_3052 | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | PFAM: Patatin; KEGG: sse:Ssed_1595 patatin. | 0.400 |