node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Swoo_0036 | Swoo_3353 | Swoo_0036 | Swoo_3353 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.515 |
Swoo_0036 | Swoo_3355 | Swoo_0036 | Swoo_3355 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | 0.697 |
Swoo_0036 | Swoo_3359 | Swoo_0036 | Swoo_3359 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.459 |
Swoo_0036 | rlmD | Swoo_0036 | Swoo_3354 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.557 |
Swoo_0036 | rsmA | Swoo_0036 | Swoo_1014 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.605 |
Swoo_0036 | rsmF | Swoo_0036 | Swoo_1986 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | RNA methylase, NOL1/NOP2/sun family; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.452 |
Swoo_0036 | trmB | Swoo_0036 | Swoo_1320 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.580 |
Swoo_2903 | rlmD | Swoo_2903 | Swoo_3354 | PFAM: peptidase S49; Peptidase S49 domain protein; KEGG: sse:Ssed_1694 peptidase S49, N-terminal domain protein. | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.565 |
Swoo_3353 | Swoo_0036 | Swoo_3353 | Swoo_0036 | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.515 |
Swoo_3353 | Swoo_3355 | Swoo_3353 | Swoo_3355 | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | 0.701 |
Swoo_3353 | Swoo_3359 | Swoo_3353 | Swoo_3359 | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.491 |
Swoo_3353 | rlmD | Swoo_3353 | Swoo_3354 | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.631 |
Swoo_3355 | Swoo_0036 | Swoo_3355 | Swoo_0036 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.697 |
Swoo_3355 | Swoo_3353 | Swoo_3355 | Swoo_3353 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.701 |
Swoo_3355 | Swoo_3356 | Swoo_3355 | Swoo_3356 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | PFAM: protein of unknown function DUF416; KEGG: sse:Ssed_1284 protein of unknown function DUF416. | 0.831 |
Swoo_3355 | Swoo_3357 | Swoo_3355 | Swoo_3357 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | KEGG: she:Shewmr4_1107 hypothetical protein. | 0.732 |
Swoo_3355 | rlmD | Swoo_3355 | Swoo_3354 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.706 |
Swoo_3355 | rsmA | Swoo_3355 | Swoo_1014 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.588 |
Swoo_3355 | rsmF | Swoo_3355 | Swoo_1986 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | RNA methylase, NOL1/NOP2/sun family; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.487 |
Swoo_3356 | Swoo_3355 | Swoo_3356 | Swoo_3355 | PFAM: protein of unknown function DUF416; KEGG: sse:Ssed_1284 protein of unknown function DUF416. | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_1285 histidine kinase. | 0.831 |