Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swoo_3450TIGRFAM: phosphate binding protein; KEGG: sse:Ssed_3301 phosphate binding protein. (323 aa)    
Predicted Functional Partners:
Swoo_3167
TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1502 phosphate ABC transporter, inner membrane subunit PstA.
 
 0.998
pstB
Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
 0.996
Swoo_3168
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1501 binding-protein-dependent transport systems inner membrane component.
 
 
 0.994
Swoo_3165
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
 
  
 0.959
Swoo_3451
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: sse:Ssed_3302 putative PAS/PAC sensor protein.
 
  
 0.841
rpmI
PFAM: ribosomal protein L35; KEGG: sfr:Sfri_2026 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
  
  
 0.522
Swoo_4136
PFAM: Alkaline phosphatase; KEGG: sse:Ssed_3974 alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
  
 0.522
Swoo_1600
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: slo:Shew_1348 flagellar basal body FlaE domain protein.
   
  
 0.521
Swoo_1207
PFAM: Alkaline phosphatase; KEGG: spl:Spea_0989 alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
  
 0.476
Swoo_1349
PFAM: Alkaline phosphatase; KEGG: sse:Ssed_1249 alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
  
 0.476
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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