Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swoo_3767PFAM: protease-associated PA domain protein; KEGG: shn:Shewana3_0797 protease-associated PA domain protein. (1311 aa)    
Predicted Functional Partners:
Swoo_0006
KEGG: sdn:Sden_0006 hypothetical protein.
  
     0.586
Swoo_4208
KEGG: sse:Ssed_0761 hypothetical protein.
  
     0.491
Swoo_3877
Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.486
Swoo_1511
KEGG: slo:Shew_1243 peptidyl-Lys metalloendopeptidase.
  
     0.445
Swoo_0647
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; PKD domain containing protein; Proprotein convertase P; KEGG: sdn:Sden_3093 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
  
 
 0.419
Swoo_0324
Endothelin-converting enzyme 1; PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: sse:Ssed_0436 endothelin-converting enzyme 1.
  
    0.408
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.