STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swoo_3950TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: sse:Ssed_3663 multisubunit Na+/H+ antiporter MnhG subunit-like protein. (113 aa)    
Predicted Functional Partners:
Swoo_3948
PFAM: cation antiporter; KEGG: sse:Ssed_3661 cation antiporter.
 
 
 0.998
Swoo_3949
PFAM: multiple resistance and pH regulation protein F; KEGG: spl:Spea_3280 multiple resistance and pH regulation protein F.
 
 
 0.998
Swoo_3951
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: sse:Ssed_3664 Na+/H+ antiporter MnhB subunit-related protein.
 
 
 0.998
Swoo_3952
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: spl:Spea_3283 NADH-ubiquinone oxidoreductase chain 4L.
 
 
 0.996
Swoo_3953
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sse:Ssed_3666 NADH dehydrogenase (quinone).
 
 
 0.994
Swoo_3956
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: spl:Spea_3287 NADH dehydrogenase (quinone).
 
 
 0.994
Swoo_3954
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sse:Ssed_3667 NADH dehydrogenase (quinone).
 
 
 0.989
Swoo_3955
KEGG: spl:Spea_3286 hypothetical protein.
 
    0.905
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
   0.863
Swoo_2870
KEGG: mca:MCA1349 NADH dehydrogenase I, L subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.853
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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