Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Swoo_4511 | Swoo_4512 | Swoo_4511 | Swoo_4512 | KEGG: sse:Ssed_0458 hypothetical protein. | PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0457 MscS mechanosensitive ion channel. | 0.489 |
| Swoo_4512 | Swoo_4511 | Swoo_4512 | Swoo_4511 | PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0457 MscS mechanosensitive ion channel. | KEGG: sse:Ssed_0458 hypothetical protein. | 0.489 |
| Swoo_4512 | gcvP | Swoo_4512 | Swoo_3967 | PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0457 MscS mechanosensitive ion channel. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.478 |
| Swoo_4512 | rimK | Swoo_4512 | Swoo_4122 | PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0457 MscS mechanosensitive ion channel. | TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; protein of unknown function DUF785; RimK domain protein ATP-grasp; KEGG: sse:Ssed_3966 alpha-L-glutamate ligase, RimK family; Belongs to the RimK family. | 0.521 |
| gcvP | Swoo_4512 | Swoo_3967 | Swoo_4512 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0457 MscS mechanosensitive ion channel. | 0.478 |
| rimK | Swoo_4512 | Swoo_4122 | Swoo_4512 | TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; protein of unknown function DUF785; RimK domain protein ATP-grasp; KEGG: sse:Ssed_3966 alpha-L-glutamate ligase, RimK family; Belongs to the RimK family. | PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0457 MscS mechanosensitive ion channel. | 0.521 |