STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (495 aa)    
Predicted Functional Partners:
Swoo_0935
PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_0836 FAD dependent oxidoreductase.
 
 0.993
Swoo_4358
PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_0595 FAD dependent oxidoreductase.
 
 0.988
aqpZ
MIP family channel protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.972
plsY
Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
    
 0.922
Swoo_1026
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sbn:Sbal195_3775 glycerophosphoryl diester phosphodiesterase.
  
  
 0.914
plsB
Glycerol-3-phosphate O-acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: sse:Ssed_0201 glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
     
 0.910
Swoo_2190
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: sse:Ssed_2416 PTS system, glucose subfamily, IIA subunit.
    
 
 0.867
Swoo_4225
Protease Do; KEGG: sse:Ssed_0744 2-alkenal reductase; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family.
   
 0.785
Swoo_4226
TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sse:Ssed_0743 2-alkenal reductase.
   
 0.785
Swoo_4183
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sse:Ssed_0785 glycerophosphoryl diester phosphodiesterase.
 
  
 0.728
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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