Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Swoo_4630 | Swoo_4631 | SMART: TIR protein; KEGG: rpb:RPB_2632 TIR. | Hypothetical protein; KEGG: ypi:YpsIP31758_B0075 putative conjugal transfer protein TraE. | 0.574 |
Swoo_4631 | Swoo_4630 | Hypothetical protein; KEGG: ypi:YpsIP31758_B0075 putative conjugal transfer protein TraE. | SMART: TIR protein; KEGG: rpb:RPB_2632 TIR. | 0.574 |
Swoo_4631 | Swoo_4632 | Hypothetical protein; KEGG: ypi:YpsIP31758_B0075 putative conjugal transfer protein TraE. | PFAM: Protein of unknown function DUF1778; KEGG: sbm:Shew185_0723 protein of unknown function DUF1778. | 0.468 |
Swoo_4631 | Swoo_4633 | Hypothetical protein; KEGG: ypi:YpsIP31758_B0075 putative conjugal transfer protein TraE. | KEGG: sbm:Shew185_0724 GCN5-related N-acetyltransferase. | 0.468 |
Swoo_4632 | Swoo_4631 | PFAM: Protein of unknown function DUF1778; KEGG: sbm:Shew185_0723 protein of unknown function DUF1778. | Hypothetical protein; KEGG: ypi:YpsIP31758_B0075 putative conjugal transfer protein TraE. | 0.468 |
Swoo_4632 | Swoo_4633 | PFAM: Protein of unknown function DUF1778; KEGG: sbm:Shew185_0723 protein of unknown function DUF1778. | KEGG: sbm:Shew185_0724 GCN5-related N-acetyltransferase. | 0.865 |
Swoo_4633 | Swoo_4631 | KEGG: sbm:Shew185_0724 GCN5-related N-acetyltransferase. | Hypothetical protein; KEGG: ypi:YpsIP31758_B0075 putative conjugal transfer protein TraE. | 0.468 |
Swoo_4633 | Swoo_4632 | KEGG: sbm:Shew185_0724 GCN5-related N-acetyltransferase. | PFAM: Protein of unknown function DUF1778; KEGG: sbm:Shew185_0723 protein of unknown function DUF1778. | 0.865 |