STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swoo_4786PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_4395 ABC transporter-related protein; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
Swoo_4787
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 0.988
Swoo_4788
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sse:Ssed_4397 molybdenum ABC transporter, periplasmic molybdate-binding protein.
 
  
 0.962
Swoo_4247
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: spl:Spea_3623 molybdenum ABC transporter, periplasmic molybdate-binding protein.
    
 0.813
Swoo_1133
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1063 binding-protein-dependent transport systems inner membrane component.
 
 0.797
Swoo_1134
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1064 ornithine carbamoyltransferase.
 
  
 0.734
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
       0.720
Swoo_4789
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: sse:Ssed_4398 molybdopterin biosynthesis protein MoaE.
       0.719
Swoo_4790
TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: sse:Ssed_4399 molybdopterin converting factor, subunit 1.
       0.719
Swoo_3105
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sse:Ssed_1549 oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
   
0.667
Swoo_4641
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: scl:sce5713 cell division cycle protein 48-related protein; Belongs to the AAA ATPase family.
  
     0.629
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.