Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC95336.1 | SKC95338.1 | SAMN05660461_0346 | SAMN05660461_0347 | Outer membrane protein OmpA. | Type IX secretion system membrane protein, PorP/SprF family. | 0.928 |
SKC95336.1 | SKC95340.1 | SAMN05660461_0346 | SAMN05660461_0348 | Outer membrane protein OmpA. | Gliding motility-associated C-terminal domain-containing protein. | 0.621 |
SKC95338.1 | SKC95336.1 | SAMN05660461_0347 | SAMN05660461_0346 | Type IX secretion system membrane protein, PorP/SprF family. | Outer membrane protein OmpA. | 0.928 |
SKC95338.1 | SKC95340.1 | SAMN05660461_0347 | SAMN05660461_0348 | Type IX secretion system membrane protein, PorP/SprF family. | Gliding motility-associated C-terminal domain-containing protein. | 0.701 |
SKC95340.1 | SKC95336.1 | SAMN05660461_0348 | SAMN05660461_0346 | Gliding motility-associated C-terminal domain-containing protein. | Outer membrane protein OmpA. | 0.621 |
SKC95340.1 | SKC95338.1 | SAMN05660461_0348 | SAMN05660461_0347 | Gliding motility-associated C-terminal domain-containing protein. | Type IX secretion system membrane protein, PorP/SprF family. | 0.701 |
SKC95340.1 | SKD00998.1 | SAMN05660461_0348 | SAMN05660461_2029 | Gliding motility-associated C-terminal domain-containing protein. | Concanavalin A-like lectin/glucanases superfamily protein. | 0.545 |
SKC95340.1 | SKD02589.1 | SAMN05660461_0348 | SAMN05660461_2578 | Gliding motility-associated C-terminal domain-containing protein. | Peptidase family S41. | 0.512 |
SKC95340.1 | SKD04630.1 | SAMN05660461_0348 | SAMN05660461_2898 | Gliding motility-associated C-terminal domain-containing protein. | Peptidase family S41. | 0.550 |
SKC95340.1 | SKD06682.1 | SAMN05660461_0348 | SAMN05660461_3517 | Gliding motility-associated C-terminal domain-containing protein. | Collagen triple helix repeat-containing protein. | 0.534 |
SKC95340.1 | SKD09261.1 | SAMN05660461_0348 | SAMN05660461_5144 | Gliding motility-associated C-terminal domain-containing protein. | Peptidase family S41. | 0.519 |
SKC95340.1 | SKD09534.1 | SAMN05660461_0348 | SAMN05660461_5423 | Gliding motility-associated C-terminal domain-containing protein. | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | 0.630 |
SKC95340.1 | SKD09880.1 | SAMN05660461_0348 | SAMN05660461_5773 | Gliding motility-associated C-terminal domain-containing protein. | Hypothetical protein. | 0.483 |
SKC95340.1 | SKD10502.1 | SAMN05660461_0348 | SAMN05660461_6420 | Gliding motility-associated C-terminal domain-containing protein. | Peptidase family S41. | 0.528 |
SKD00998.1 | SKC95340.1 | SAMN05660461_2029 | SAMN05660461_0348 | Concanavalin A-like lectin/glucanases superfamily protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.545 |
SKD00998.1 | SKD09534.1 | SAMN05660461_2029 | SAMN05660461_5423 | Concanavalin A-like lectin/glucanases superfamily protein. | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | 0.555 |
SKD00998.1 | SKD09880.1 | SAMN05660461_2029 | SAMN05660461_5773 | Concanavalin A-like lectin/glucanases superfamily protein. | Hypothetical protein. | 0.444 |
SKD02589.1 | SKC95340.1 | SAMN05660461_2578 | SAMN05660461_0348 | Peptidase family S41. | Gliding motility-associated C-terminal domain-containing protein. | 0.512 |
SKD04630.1 | SKC95340.1 | SAMN05660461_2898 | SAMN05660461_0348 | Peptidase family S41. | Gliding motility-associated C-terminal domain-containing protein. | 0.550 |
SKD06682.1 | SKC95340.1 | SAMN05660461_3517 | SAMN05660461_0348 | Collagen triple helix repeat-containing protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.534 |
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