STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC95377.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
SKC95381.1
4-hydroxy-3-polyprenylbenzoate decarboxylase; Belongs to the UbiD family.
       0.788
SKD09436.1
Hypothetical protein.
  
     0.733
SKD08691.1
AsmA-like C-terminal region.
  
     0.620
SKD09051.1
AsmA protein.
  
     0.611
SKC95384.1
Hypothetical protein.
       0.520
SKD06682.1
Collagen triple helix repeat-containing protein.
  
     0.508
SKD00387.1
Hypothetical protein.
  
     0.500
SKD08564.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.451
SKD09627.1
Hypothetical protein.
  
     0.443
SKD08565.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.436
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.