Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SKC95414.1Ribosomal-protein-alanine N-acetyltransferase. (184 aa)    
Predicted Functional Partners:
SKC95417.1
Phosphinothricin acetyltransferase.
    
 0.801
SKD08274.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.716
SKD05741.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
    
  0.695
SKD07730.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.687
SKC95419.1
Transporter family protein.
       0.569
SKC95410.1
Signal transduction histidine kinase.
       0.527
SKC95412.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.527
SKD07635.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.515
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
  0.489
SKD02784.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
     
  0.485
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.