Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
SKC95999.1Putative membrane protein. (338 aa)    
Predicted Functional Partners:
SKC95997.1
Hypothetical protein.
 
     0.867
SKC96001.1
Ion channel.
 
     0.814
SKC96007.1
Hypothetical protein.
 
     0.551
SKC96004.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.504
SKC96010.1
Arsenite transporter, ACR3 family.
       0.476
SKC96013.1
Phosphinothricin acetyltransferase.
       0.438
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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