STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC96718.1Glycosyltransferase involved in cell wall bisynthesis. (332 aa)    
Predicted Functional Partners:
SKC96722.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.813
SKC96712.1
Dihydroorotase.
       0.777
SKC96716.1
Protein of unknown function.
       0.768
SKC96733.1
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.620
SKD06906.1
dTDP-glucose 4,6-dehydratase.
 
 
  0.591
gmhA
D-sedoheptulose 7-phosphate isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
   
 
 0.566
SKC99454.1
Dolichol-phosphate mannosyltransferase.
  
  
 
0.549
SKC96726.1
D-glycero-alpha-D-manno-heptose-7-phosphate kinase.
  
    0.548
SKC96746.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
   
 0.539
SKD06009.1
Phosphomannomutase.
 
  
 0.507
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.