STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC97204.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (492 aa)    
Predicted Functional Partners:
SKC97192.1
HEAT repeats.
 
     0.938
SKC97210.1
Outer membrane protein, YaiO family.
 
    0.911
SKC97213.1
F5/8 type C domain-containing protein.
 
     0.803
SKC97188.1
Response regulator receiver domain-containing protein.
 
     0.783
SKC97200.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
    
0.741
SKD08713.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 
 0.637
SKD06501.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
 0.613
SKD05953.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
 
 0.606
SKD07697.1
Tetratricopeptide repeat-containing protein.
  
  0.602
SKD02793.1
HAD-superfamily hydrolase, subfamily IIB.
  
 
 0.596
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
Server load: low (26%) [HD]