Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SKC97383.1Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (381 aa)    
Predicted Functional Partners:
SKD00247.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.983
SKD02427.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.890
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.873
SKC99263.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.866
SKD09357.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.851
SKD00256.1
Glucokinase.
 
  
 0.844
glk
Glucokinase; Belongs to the bacterial glucokinase family.
    
 0.821
SKC97160.1
Beta-galactosidase/beta-glucuronidase.
  
 
 0.820
SKD09386.1
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
    
 0.819
SKC97317.1
Putative Ig domain-containing protein.
    
 0.818
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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