STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC98306.1NADP-dependent aldehyde dehydrogenase. (520 aa)    
Predicted Functional Partners:
SKC98316.1
2-dehydro-3-deoxy-D-arabinonate dehydratase.
 
 
 0.919
SKD07730.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 0.866
SKD08274.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.855
SKD02784.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.836
SKC98309.1
L-fucose dehydrogenase.
  
  0.827
SKD09636.1
4-hydroxyproline epimerase; Belongs to the proline racemase family.
 
 
 0.795
SKD07635.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.775
SKD01107.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.744
SKD00379.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
     
 0.730
SKD05473.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
 
 0.730
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.