Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC99164.1 | SKC99169.1 | SAMN05660461_1388 | SAMN05660461_1389 | Protein of unknown function; Manually curated. | Hypothetical protein. | 0.773 |
SKC99164.1 | SKC99171.1 | SAMN05660461_1388 | SAMN05660461_1390 | Protein of unknown function; Manually curated. | Hypothetical protein. | 0.723 |
SKC99164.1 | SKC99175.1 | SAMN05660461_1388 | SAMN05660461_1391 | Protein of unknown function; Manually curated. | Glycine cleavage system H protein. | 0.723 |
SKC99169.1 | SKC99164.1 | SAMN05660461_1389 | SAMN05660461_1388 | Hypothetical protein. | Protein of unknown function; Manually curated. | 0.773 |
SKC99169.1 | SKC99171.1 | SAMN05660461_1389 | SAMN05660461_1390 | Hypothetical protein. | Hypothetical protein. | 0.723 |
SKC99169.1 | SKC99175.1 | SAMN05660461_1389 | SAMN05660461_1391 | Hypothetical protein. | Glycine cleavage system H protein. | 0.723 |
SKC99171.1 | SKC99164.1 | SAMN05660461_1390 | SAMN05660461_1388 | Hypothetical protein. | Protein of unknown function; Manually curated. | 0.723 |
SKC99171.1 | SKC99169.1 | SAMN05660461_1390 | SAMN05660461_1389 | Hypothetical protein. | Hypothetical protein. | 0.723 |
SKC99171.1 | SKC99175.1 | SAMN05660461_1390 | SAMN05660461_1391 | Hypothetical protein. | Glycine cleavage system H protein. | 0.816 |
SKC99171.1 | SKD02571.1 | SAMN05660461_1390 | SAMN05660461_2571 | Hypothetical protein. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.582 |
SKC99171.1 | SKD06559.1 | SAMN05660461_1390 | SAMN05660461_3474 | Hypothetical protein. | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | 0.575 |
SKC99171.1 | SKD06855.1 | SAMN05660461_1390 | SAMN05660461_3583 | Hypothetical protein. | 2-oxoisovalerate dehydrogenase E1 component. | 0.575 |
SKC99171.1 | SKD10361.1 | SAMN05660461_1390 | SAMN05660461_6273 | Hypothetical protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.617 |
SKC99171.1 | SKD10533.1 | SAMN05660461_1390 | SAMN05660461_6454 | Hypothetical protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein; Partial gene; manually curated. | 0.617 |
SKC99171.1 | SKD10537.1 | SAMN05660461_1390 | SAMN05660461_6458 | Hypothetical protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.617 |
SKC99171.1 | gcvP | SAMN05660461_1390 | SAMN05660461_3172 | Hypothetical protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.832 |
SKC99175.1 | SKC99164.1 | SAMN05660461_1391 | SAMN05660461_1388 | Glycine cleavage system H protein. | Protein of unknown function; Manually curated. | 0.723 |
SKC99175.1 | SKC99169.1 | SAMN05660461_1391 | SAMN05660461_1389 | Glycine cleavage system H protein. | Hypothetical protein. | 0.723 |
SKC99175.1 | SKC99171.1 | SAMN05660461_1391 | SAMN05660461_1390 | Glycine cleavage system H protein. | Hypothetical protein. | 0.816 |
SKC99175.1 | SKD06559.1 | SAMN05660461_1391 | SAMN05660461_3474 | Glycine cleavage system H protein. | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | 0.999 |
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