Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKD00330.1 | SKD00337.1 | SAMN05660461_1779 | SAMN05660461_1781 | DinB superfamily protein. | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | 0.577 |
SKD00330.1 | SKD00340.1 | SAMN05660461_1779 | SAMN05660461_1782 | DinB superfamily protein. | Kef-type K+ transport system, membrane component KefB. | 0.494 |
SKD00330.1 | aat | SAMN05660461_1779 | SAMN05660461_1780 | DinB superfamily protein. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.576 |
SKD00337.1 | SKD00330.1 | SAMN05660461_1781 | SAMN05660461_1779 | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | DinB superfamily protein. | 0.577 |
SKD00337.1 | SKD00340.1 | SAMN05660461_1781 | SAMN05660461_1782 | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | Kef-type K+ transport system, membrane component KefB. | 0.544 |
SKD00337.1 | aat | SAMN05660461_1781 | SAMN05660461_1780 | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.844 |
SKD00340.1 | SKD00330.1 | SAMN05660461_1782 | SAMN05660461_1779 | Kef-type K+ transport system, membrane component KefB. | DinB superfamily protein. | 0.494 |
SKD00340.1 | SKD00337.1 | SAMN05660461_1782 | SAMN05660461_1781 | Kef-type K+ transport system, membrane component KefB. | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | 0.544 |
SKD00340.1 | aat | SAMN05660461_1782 | SAMN05660461_1780 | Kef-type K+ transport system, membrane component KefB. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.548 |
aat | SKD00330.1 | SAMN05660461_1780 | SAMN05660461_1779 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | DinB superfamily protein. | 0.576 |
aat | SKD00337.1 | SAMN05660461_1780 | SAMN05660461_1781 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | 0.844 |
aat | SKD00340.1 | SAMN05660461_1780 | SAMN05660461_1782 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Kef-type K+ transport system, membrane component KefB. | 0.548 |