STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKD00635.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (394 aa)    
Predicted Functional Partners:
SKD09618.1
Glucokinase.
  
     0.700
SKD00279.1
Glucosamine-6-phosphate deaminase.
    
 0.575
SKC94865.1
Glycosyl hydrolase catalytic core.
  
 
 0.532
SKC99593.1
4-alpha-glucanotransferase.
   
 0.514
SKD02339.1
Hypothetical protein.
    
  0.514
SKD02342.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
  0.514
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.506
SKD00612.1
Levanase; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.502
SKD00632.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.500
SKD06464.1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.498
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.