STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKD00690.1Por secretion system C-terminal sorting domain-containing protein. (1094 aa)    
Predicted Functional Partners:
SKD09880.1
Hypothetical protein.
 
 0.757
SKD08928.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.703
SKD09534.1
DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family.
 
 
  0.654
SKC95737.1
Endo-1,4-beta-xylanase.
  
  
  0.613
SKC95741.1
Beta-xylosidase.
  
  
  0.605
SKD09924.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.598
SKD00730.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.550
SKD09726.1
Hypothetical protein.
  
     0.537
SKC96186.1
Hypothetical protein.
  
     0.527
SKC99189.1
Hypothetical protein.
  
     0.521
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.