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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKD00703.1Histidine kinase. (396 aa)    
Predicted Functional Partners:
SKD00706.1
Two component transcriptional regulator, LytTR family.
 
  0.962
SKC95027.1
Two component transcriptional regulator, LytTR family.
  
  0.843
SKC98435.1
Two component transcriptional regulator, LytTR family.
  
  0.843
SKD06014.1
Two component transcriptional regulator, LytTR family.
  
  0.843
SKD10155.1
Two component transcriptional regulator, LytTR family.
  
  0.842
SKC95003.1
Two component transcriptional regulator, LytTR family.
  
  0.841
SKC95296.1
Two component transcriptional regulator, LytTR family.
  
  0.841
SKC95796.1
Two component transcriptional regulator, LytTR family.
  
  0.841
SKC95925.1
Two component transcriptional regulator, LytTR family.
  
  0.841
SKC96274.1
Two component transcriptional regulator, LytTR family.
  
  0.841
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.