STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKD00730.1Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (485 aa)    
Predicted Functional Partners:
SKD00733.1
Hypothetical protein.
 
     0.866
SKD00736.1
Starch-binding associating with outer membrane.
 
 
   0.863
SKD07061.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.833
SKD09253.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
  
  0.735
SKC96228.1
Protein of unknown function, DUF255.
   
  0.732
SKD03123.1
Hypothetical protein.
   
  0.732
SKD09351.1
Hypothetical protein.
   
  0.732
SKD09934.1
Hypothetical protein.
   
  0.732
SKD10458.1
Thioredoxin-related protein.
   
  0.732
SKD00728.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.730
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.