SKD00781.1 protein (Chitinophaga ginsengisegetis)

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Score

SKD00781.1

HTH domain-containing protein. (230 aa)

Predicted Functional Partners:

rpoB

0.705

rpoC

0.694

rpoA

0.694

SKD01482.1

0.679

SKD08817.1

0.642

SKD00784.1

0.640

SKD10182.1

0.638

SKD10438.1

0.638

SKD00778.1

0.581

Your Current Organism:

Chitinophaga ginsengisegetis

NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SKD00778.1	SKD00781.1	SAMN05660461_1951	SAMN05660461_1952	Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).	HTH domain-containing protein.	0.581
SKD00778.1	SKD00784.1	SAMN05660461_1951	SAMN05660461_1953	Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).	Suppressor of fused protein (SUFU).	0.449
SKD00781.1	SKD00778.1	SAMN05660461_1952	SAMN05660461_1951	HTH domain-containing protein.	Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).	0.581
SKD00781.1	SKD00784.1	SAMN05660461_1952	SAMN05660461_1953	HTH domain-containing protein.	Suppressor of fused protein (SUFU).	0.640
SKD00781.1	SKD01482.1	SAMN05660461_1952	SAMN05660461_2189	HTH domain-containing protein.	RNA polymerase Rpb6.	0.679
SKD00781.1	SKD08817.1	SAMN05660461_1952	SAMN05660461_4694	HTH domain-containing protein.	DNA polymerase-3 subunit epsilon.	0.642
SKD00781.1	SKD10182.1	SAMN05660461_1952	SAMN05660461_6086	HTH domain-containing protein.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.638
SKD00781.1	SKD10438.1	SAMN05660461_1952	SAMN05660461_6353	HTH domain-containing protein.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.638
SKD00781.1	rpoA	SAMN05660461_1952	SAMN05660461_3480	HTH domain-containing protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.694
SKD00781.1	rpoB	SAMN05660461_1952	SAMN05660461_3387	HTH domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.705
SKD00781.1	rpoC	SAMN05660461_1952	SAMN05660461_3386	HTH domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.694
SKD00784.1	SKD00778.1	SAMN05660461_1953	SAMN05660461_1951	Suppressor of fused protein (SUFU).	Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).	0.449
SKD00784.1	SKD00781.1	SAMN05660461_1953	SAMN05660461_1952	Suppressor of fused protein (SUFU).	HTH domain-containing protein.	0.640
SKD01482.1	SKD00781.1	SAMN05660461_2189	SAMN05660461_1952	RNA polymerase Rpb6.	HTH domain-containing protein.	0.679
SKD01482.1	SKD08817.1	SAMN05660461_2189	SAMN05660461_4694	RNA polymerase Rpb6.	DNA polymerase-3 subunit epsilon.	0.415
SKD01482.1	SKD10182.1	SAMN05660461_2189	SAMN05660461_6086	RNA polymerase Rpb6.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.833
SKD01482.1	SKD10438.1	SAMN05660461_2189	SAMN05660461_6353	RNA polymerase Rpb6.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.833
SKD01482.1	rpoA	SAMN05660461_2189	SAMN05660461_3480	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
SKD01482.1	rpoB	SAMN05660461_2189	SAMN05660461_3387	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.991
SKD01482.1	rpoC	SAMN05660461_2189	SAMN05660461_3386	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.982