STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKD00966.1Glucokinase. (286 aa)    
Predicted Functional Partners:
SKD00968.1
Glucosamine-6-phosphate isomerase; Manually curated.
 
  
 0.867
SKC99894.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.756
SKD00973.1
Predicted dehydrogenase.
 
     0.747
SKD00959.1
Protein of unknown function.
 
  
  0.686
SKD00963.1
Choline dehydrogenase.
    
  0.680
SKD00976.1
Glycosyl hydrolases family 16.
       0.643
SKD00279.1
Glucosamine-6-phosphate deaminase.
 
  
 0.626
SKD00961.1
Gluconate 2-dehydrogenase subunit 3.
       0.618
SKD00978.1
Starch-binding associating with outer membrane.
       0.588
SKC94865.1
Glycosyl hydrolase catalytic core.
  
 
 0.532
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.