STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKD02133.1O-Glycosyl hydrolase. (508 aa)    
Predicted Functional Partners:
SKD02136.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
 0.895
SKD09259.1
Xylan 1,4-beta-xylosidase.
  
  
  0.816
SKD02130.1
Starch-binding associating with outer membrane.
 
  
  0.711
SKD00722.1
Xylan 1,4-beta-xylosidase.
  
  
  0.701
SKC94865.1
Glycosyl hydrolase catalytic core.
    
 0.630
SKC95740.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.611
SKD09534.1
DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family.
  
  
  0.606
SKD02127.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.597
SKD09898.1
Glycosyltransferase, GT2 family.
    
  0.555
SKC97028.1
Beta-galactosidase.
 
 0.554
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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