Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC99909.1 | SKD04495.1 | SAMN05660461_1642 | SAMN05660461_2859 | Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | FecR family protein. | 0.674 |
SKC99909.1 | SKD04890.1 | SAMN05660461_1642 | SAMN05660461_2961 | Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.511 |
SKC99909.1 | SKD09476.1 | SAMN05660461_1642 | SAMN05660461_5365 | Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.463 |
SKC99909.1 | SKD09856.1 | SAMN05660461_1642 | SAMN05660461_5749 | Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.596 |
SKC99909.1 | SKD09978.1 | SAMN05660461_1642 | SAMN05660461_5878 | Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.592 |
SKD01963.1 | SKD04495.1 | SAMN05660461_2367 | SAMN05660461_2859 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.648 |
SKD04495.1 | SKC99909.1 | SAMN05660461_2859 | SAMN05660461_1642 | FecR family protein. | Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.674 |
SKD04495.1 | SKD01963.1 | SAMN05660461_2859 | SAMN05660461_2367 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.648 |
SKD04495.1 | SKD04498.1 | SAMN05660461_2859 | SAMN05660461_2860 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.579 |
SKD04495.1 | SKD04890.1 | SAMN05660461_2859 | SAMN05660461_2961 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.702 |
SKD04495.1 | SKD06106.1 | SAMN05660461_2859 | SAMN05660461_3308 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily; Non-canonical start codon; manually curated; Belongs to the sigma-70 factor family. ECF subfamily. | 0.548 |
SKD04495.1 | SKD07091.1 | SAMN05660461_2859 | SAMN05660461_3694 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.680 |
SKD04495.1 | SKD09476.1 | SAMN05660461_2859 | SAMN05660461_5365 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.731 |
SKD04495.1 | SKD09575.1 | SAMN05660461_2859 | SAMN05660461_5464 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.584 |
SKD04495.1 | SKD09856.1 | SAMN05660461_2859 | SAMN05660461_5749 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.737 |
SKD04495.1 | SKD09978.1 | SAMN05660461_2859 | SAMN05660461_5878 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.744 |
SKD04498.1 | SKD04495.1 | SAMN05660461_2860 | SAMN05660461_2859 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.579 |
SKD04890.1 | SKC99909.1 | SAMN05660461_2961 | SAMN05660461_1642 | RNA polymerase sigma-70 factor, ECF subfamily. | Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.511 |
SKD04890.1 | SKD04495.1 | SAMN05660461_2961 | SAMN05660461_2859 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.702 |
SKD06106.1 | SKD04495.1 | SAMN05660461_3308 | SAMN05660461_2859 | RNA polymerase sigma-70 factor, ECF subfamily; Non-canonical start codon; manually curated; Belongs to the sigma-70 factor family. ECF subfamily. | FecR family protein. | 0.548 |
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