Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SKD05828.1Phosphotransferase enzyme family protein. (365 aa)    
Predicted Functional Partners:
SKD05830.1
dTDP-glucose pyrophosphorylase.
   
 0.989
SKC97059.1
Aspartate kinase.
  
 
 0.878
SKC94749.1
Cystathionine beta-synthase.
    
  0.758
SKC97064.1
Threonine synthase.
    
 0.620
SKD06221.1
Tat (twin-arginine translocation) pathway signal sequence.
 
  
  0.613
SKD01228.1
Rhodanese-related sulfurtransferase.
  
 
 0.606
SKD00244.1
Predicted dehydrogenase.
 
  
  0.583
SKD05832.1
alpha-L-fucosidase.
       0.532
SKD05811.1
Acetolactate synthase, small subunit.
     
  0.524
SKD00187.1
Homoserine dehydrogenase.
    
 0.516
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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