Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
SKD06740.1Thiol-disulfide isomerase or thioredoxin. (457 aa)    
Predicted Functional Partners:
SKD06738.1
Peroxiredoxin.
 
     0.892
SKD09340.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.761
SKC97773.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.760
SKD00849.1
Peroxiredoxin.
  
     0.759
SKD09339.1
Peroxiredoxin.
  
     0.758
SKD05137.1
Peroxiredoxin.
  
     0.751
SKD06043.1
Peroxiredoxin.
  
     0.748
SKD09861.1
Peroxiredoxin.
  
     0.741
SKD08961.1
Peroxiredoxin.
  
     0.740
SKD06041.1
Peroxiredoxin.
  
     0.739
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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