Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC95013.1 | SKD01182.1 | SAMN05660461_0193 | SAMN05660461_2092 | Helix-turn-helix domain-containing protein. | AraC-type transcriptional regulator N-terminus. | 0.750 |
SKC95013.1 | SKD09318.1 | SAMN05660461_0193 | SAMN05660461_5202 | Helix-turn-helix domain-containing protein. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.627 |
SKC95013.1 | SKD09885.1 | SAMN05660461_0193 | SAMN05660461_5778 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.616 |
SKC95013.1 | SKD10223.1 | SAMN05660461_0193 | SAMN05660461_6127 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.701 |
SKC95013.1 | SKD10279.1 | SAMN05660461_0193 | SAMN05660461_6186 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.675 |
SKD01182.1 | SKC95013.1 | SAMN05660461_2092 | SAMN05660461_0193 | AraC-type transcriptional regulator N-terminus. | Helix-turn-helix domain-containing protein. | 0.750 |
SKD01182.1 | SKD02863.1 | SAMN05660461_2092 | SAMN05660461_2668 | AraC-type transcriptional regulator N-terminus. | AraC-type DNA-binding protein. | 0.727 |
SKD01182.1 | SKD09220.1 | SAMN05660461_2092 | SAMN05660461_5103 | AraC-type transcriptional regulator N-terminus. | AraC-type DNA-binding protein. | 0.756 |
SKD01182.1 | SKD09318.1 | SAMN05660461_2092 | SAMN05660461_5202 | AraC-type transcriptional regulator N-terminus. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.662 |
SKD01182.1 | SKD10279.1 | SAMN05660461_2092 | SAMN05660461_6186 | AraC-type transcriptional regulator N-terminus. | AraC-type DNA-binding protein. | 0.716 |
SKD02863.1 | SKD01182.1 | SAMN05660461_2668 | SAMN05660461_2092 | AraC-type DNA-binding protein. | AraC-type transcriptional regulator N-terminus. | 0.727 |
SKD02863.1 | SKD09220.1 | SAMN05660461_2668 | SAMN05660461_5103 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.756 |
SKD02863.1 | SKD09318.1 | SAMN05660461_2668 | SAMN05660461_5202 | AraC-type DNA-binding protein. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.650 |
SKD02863.1 | SKD09885.1 | SAMN05660461_2668 | SAMN05660461_5778 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.616 |
SKD07025.1 | SKD09318.1 | SAMN05660461_3661 | SAMN05660461_5202 | Cyclohexyl-isocyanide hydratase. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.626 |
SKD09220.1 | SKD01182.1 | SAMN05660461_5103 | SAMN05660461_2092 | AraC-type DNA-binding protein. | AraC-type transcriptional regulator N-terminus. | 0.756 |
SKD09220.1 | SKD02863.1 | SAMN05660461_5103 | SAMN05660461_2668 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.756 |
SKD09220.1 | SKD09318.1 | SAMN05660461_5103 | SAMN05660461_5202 | AraC-type DNA-binding protein. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.740 |
SKD09220.1 | SKD09885.1 | SAMN05660461_5103 | SAMN05660461_5778 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.718 |
SKD09220.1 | SKD10223.1 | SAMN05660461_5103 | SAMN05660461_6127 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.713 |
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