STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKD09695.1Glycosyl transferase family 2. (312 aa)    
Predicted Functional Partners:
SKD09289.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
 
 0.838
SKD09698.1
Glycosyltransferase involved in cell wall bisynthesis.
    0.828
SKD09699.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.788
SKD09696.1
Methyltransferase domain-containing protein.
    
  0.781
SKD09282.1
Methyltransferase, FkbM family.
 
    0.695
SKD09697.1
Polysaccharide deacetylase.
       0.691
SKD09694.1
Lipoprotein Spr.
       0.539
SKD09700.1
Predicted O-methyltransferase YrrM.
       0.468
SKD09701.1
Glycosyltransferase, GT2 family.
       0.460
SKD09647.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.433
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.