STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKD10108.1Hypothetical protein. (393 aa)    
Predicted Functional Partners:
SKD10109.1
Hypothetical protein.
       0.791
SKD10107.1
Hypothetical protein.
       0.787
SKD10106.1
Hypothetical protein.
       0.770
SKD10104.1
Hypothetical protein.
       0.765
SKD10105.1
Hypothetical protein.
       0.765
SKD10103.1
Hypothetical protein.
       0.761
SKD10102.1
Hypothetical protein.
       0.618
SKD10101.1
Hypothetical protein.
       0.613
SKD10100.1
Hypothetical protein.
       0.456
SKD10110.1
Hypothetical protein.
       0.420
Your Current Organism:
Chitinophaga ginsengisegetis
NCBI taxonomy Id: 393003
Other names: C. ginsengisegetis, Chitinophaga ginsengisegetis Lee et al. 2007, DSM 18108, KCTC 12654, strain Gsoil 040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.