Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKD05511.1 | SKD08622.1 | SAMN05660461_3117 | SAMN05660461_4494 | LysM domain-containing protein. | Beta-lactamase enzyme family protein. | 0.679 |
SKD05511.1 | SKD10165.1 | SAMN05660461_3117 | SAMN05660461_6069 | LysM domain-containing protein. | Beta-lactamase enzyme family protein. | 0.408 |
SKD06916.1 | SKD10165.1 | SAMN05660461_3612 | SAMN05660461_6069 | Hypothetical protein. | Beta-lactamase enzyme family protein. | 0.440 |
SKD08198.1 | SKD08622.1 | SAMN05660461_4150 | SAMN05660461_4494 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Beta-lactamase enzyme family protein. | 0.666 |
SKD08198.1 | SKD10165.1 | SAMN05660461_4150 | SAMN05660461_6069 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Beta-lactamase enzyme family protein. | 0.540 |
SKD08622.1 | SKD05511.1 | SAMN05660461_4494 | SAMN05660461_3117 | Beta-lactamase enzyme family protein. | LysM domain-containing protein. | 0.679 |
SKD08622.1 | SKD08198.1 | SAMN05660461_4494 | SAMN05660461_4150 | Beta-lactamase enzyme family protein. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.666 |
SKD08622.1 | SKD10165.1 | SAMN05660461_4494 | SAMN05660461_6069 | Beta-lactamase enzyme family protein. | Beta-lactamase enzyme family protein. | 0.431 |
SKD10164.1 | SKD10165.1 | SAMN05660461_6068 | SAMN05660461_6069 | Protein of unknown function. | Beta-lactamase enzyme family protein. | 0.706 |
SKD10164.1 | secF | SAMN05660461_6068 | SAMN05660461_6070 | Protein of unknown function. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.461 |
SKD10165.1 | SKD05511.1 | SAMN05660461_6069 | SAMN05660461_3117 | Beta-lactamase enzyme family protein. | LysM domain-containing protein. | 0.408 |
SKD10165.1 | SKD06916.1 | SAMN05660461_6069 | SAMN05660461_3612 | Beta-lactamase enzyme family protein. | Hypothetical protein. | 0.440 |
SKD10165.1 | SKD08198.1 | SAMN05660461_6069 | SAMN05660461_4150 | Beta-lactamase enzyme family protein. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.540 |
SKD10165.1 | SKD08622.1 | SAMN05660461_6069 | SAMN05660461_4494 | Beta-lactamase enzyme family protein. | Beta-lactamase enzyme family protein. | 0.431 |
SKD10165.1 | SKD10164.1 | SAMN05660461_6069 | SAMN05660461_6068 | Beta-lactamase enzyme family protein. | Protein of unknown function. | 0.706 |
SKD10165.1 | secF | SAMN05660461_6069 | SAMN05660461_6070 | Beta-lactamase enzyme family protein. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.500 |
secF | SKD10164.1 | SAMN05660461_6070 | SAMN05660461_6068 | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Protein of unknown function. | 0.461 |
secF | SKD10165.1 | SAMN05660461_6070 | SAMN05660461_6069 | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Beta-lactamase enzyme family protein. | 0.500 |