STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ02717.1Peptide/nickel transport system ATP-binding protein. (553 aa)    
Predicted Functional Partners:
SFQ02699.1
Peptide/nickel transport system permease protein.
  
 0.998
SFQ66963.1
Peptide/nickel transport system permease protein.
  
 0.985
SFQ02678.1
Peptide/nickel transport system permease protein.
  
 0.984
SFQ09560.1
Oligopeptide transport system permease protein.
  
 0.980
SFQ61987.1
Dipeptide transport system permease protein.
  
 0.980
SFQ70865.1
Peptide/nickel transport system permease protein.
  
 0.980
SFQ02660.1
Peptide/nickel transport system substrate-binding protein.
 
  
  0.970
SFQ02644.1
Peptide/nickel transport system substrate-binding protein.
  
  0.965
SFQ64697.1
Microcin C transport system permease protein.
  
  0.898
SFQ66951.1
Peptide/nickel transport system permease protein.
  
 0.851
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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