STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ25169.1Sugar transporter. (415 aa)    
Predicted Functional Partners:
SFQ25147.1
Uncharacterized conserved protein, DUF924 family.
     0.715
SFQ29838.1
Membrane fusion protein, adhesin transport system.
  
 0.635
SFQ39519.1
Hypothetical protein.
  
 0.635
SFQ39643.1
RND family efflux transporter, MFP subunit.
  
 0.635
SFQ45687.1
HlyD family secretion protein.
  
 0.635
SFQ25189.1
S-adenosylmethionine:tRNA ribosyltransferase-isomerase.
       0.621
SFQ25207.1
Protein of unknown function.
       0.606
SFQ59938.1
Hypothetical protein.
  
  
  0.496
SFQ25128.1
Dihydrolipoamide dehydrogenase.
     
 0.463
SFQ25236.1
Peroxiredoxin Q/BCP.
       0.432
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.