STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ19491.1glycyl-tRNA synthetase alpha chain. (312 aa)    
Predicted Functional Partners:
SFQ19450.1
glycyl-tRNA synthetase beta chain.
 0.999
SFQ19470.1
Hypothetical protein.
 
 0.999
SFQ76364.1
histidyl-tRNA synthetase.
  
  
 0.918
SFQ21040.1
alanyl-tRNA synthetase.
  
  
 0.909
SFQ54400.1
GMP synthase (glutamine-hydrolyzing).
  
    0.850
SFQ59949.1
ATP synthase F1 subcomplex delta subunit.
   
    0.839
SFQ53131.1
Biotin carboxyl carrier protein.
   
  
 0.832
SFQ38027.1
phenylalanyl-tRNA synthetase, alpha subunit.
   
  
 0.821
SFQ67839.1
ATP synthase F0 subcomplex B subunit.
   
    0.788
SFQ38443.1
SSU ribosomal protein S7P.
   
  
 0.774
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.