STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ19557.1GTP cyclohydrolase I. (367 aa)    
Predicted Functional Partners:
SFQ41507.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
    
 0.958
SFQ37933.1
Pyruvate kinase.
    
  0.889
SFQ69329.1
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II.
     
 0.886
SFQ19388.1
Dihydroneopterin aldolase.
 
  
 0.880
SFQ48253.1
GTP cyclohydrolase II.
     
 0.872
SFQ04440.1
Response regulator receiver domain-containing protein.
    
  0.854
SFQ08552.1
Cobalamin biosynthesis protein CobW.
  
  
 0.839
SFQ66737.1
GTPase, G3E family.
  
  
 0.839
SFQ06038.1
Signal transduction histidine kinase.
  
  
  0.818
SFQ79909.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
    
  0.805
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.