STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ20009.15'-nucleotidase /3'-nucleotidase. (263 aa)    
Predicted Functional Partners:
SFQ20027.1
protein-L-isoaspartate(D-aspartate) O-methyltransferase.
  
 0.965
SFQ54400.1
GMP synthase (glutamine-hydrolyzing).
    
 0.951
SFQ21532.1
Uridylate kinase.
  
  
 0.929
SFQ21205.1
IMP dehydrogenase.
    
 0.925
SFQ73236.1
Cytidylate kinase.
    
 0.921
SFQ53517.1
Adenylosuccinate lyase.
    
 0.911
SFQ61354.1
Thymidine phosphorylase.
    
 0.910
SFQ49024.1
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
     
 0.909
SFQ27959.1
GMP synthase (glutamine-hydrolysing).
    
 0.908
SFQ49419.1
Orotidine-5'-phosphate decarboxylase.
    
 0.908
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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