STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ37352.1Nucleobase:cation symporter-2, NCS2 family. (464 aa)    
Predicted Functional Partners:
SFQ39587.1
Aspartate carbamoyltransferase.
  
  
 0.967
SFQ49419.1
Orotidine-5'-phosphate decarboxylase.
  
  
 0.937
SFQ19720.1
Orotate phosphoribosyltransferase.
  
  
 0.936
SFQ60822.1
Carbamoyl-phosphate synthase large subunit.
  
  
 0.926
SFQ19114.1
Carbamoyl-phosphate synthase small subunit.
  
  
 0.924
SFQ03515.1
Dihydropyrimidinase.
  
  
 0.893
SFQ39562.1
Dihydroorotase.
  
  
 0.893
SFQ57839.1
Dihydropyrimidinase.
  
  
 0.893
SFQ75825.1
Dihydropyrimidinase.
  
  
 0.893
SFQ03597.1
Dihydroorotate oxidase B, catalytic subunit.
  
  
 0.857
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.