STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ44448.1Selenophosphate synthase. (716 aa)    
Predicted Functional Partners:
SFQ44522.1
Multisubunit potassium/proton antiporter, PhaA subunit /multisubunit potassium/proton antiporter, PhaB subunit.
  
 
 0.980
SFQ03783.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
     
 0.970
SFQ63339.1
Hydrogenase maturation protease.
    
 
 0.946
SFQ60657.1
Thioredoxin reductase (NADPH).
    
 0.944
SFQ05400.1
NADH dehydrogenase subunit L.
  
 
 0.921
SFQ44432.1
tRNA 2-selenouridine synthase.
   
 0.914
SFQ20698.1
Cysteine desulfurase.
   
 0.911
SFQ55927.1
Thioredoxin.
   
 0.896
SFQ46399.1
Thioredoxin.
   
 0.895
SFQ48299.1
Thioredoxin.
   
 0.895
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.