STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ44686.1Glutamate synthase (NADPH) small subunit. (477 aa)    
Predicted Functional Partners:
SFQ44675.1
Glutamate synthase (NADPH) large subunit.
 0.999
SFQ57101.1
Glutamate synthase domain-containing protein 2.
 
 0.999
SFQ67626.1
N-methylglutamate synthase subunit C precursor.
 
 0.999
SFQ67607.1
N-methylglutamate synthase subunit A.
  
 0.995
SFQ67614.1
N-methylglutamate synthase subunit B.
  
 0.995
SFQ03597.1
Dihydroorotate oxidase B, catalytic subunit.
 0.993
SFQ03783.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
 
 
 0.990
SFQ05098.1
NADH dehydrogenase subunit F.
   
 0.975
SFQ03756.1
NAD-dependent formate dehydrogenase catalytic subunit /NAD-dependent formate dehydrogenase iron-sulfur protein.
   
 0.974
SFQ67175.1
Dihydroorotate oxidase B, catalytic subunit.
 0.968
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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