STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ58054.1Hemolysin-type calcium-binding repeat-containing protein. (539 aa)    
Predicted Functional Partners:
SFQ75455.1
Peptidase M10 serralysin C terminal.
  
 
  0.921
SFQ10973.1
Intein N-terminal splicing region.
 
  
  0.807
SFQ58045.1
Conserved repeat domain-containing protein.
   
  0.790
SFQ56203.1
Hint domain-containing protein.
 
  
  0.772
SFQ59793.1
Hint domain-containing protein.
 
  
  0.772
SFQ02349.1
Ca2+-binding protein, RTX toxin-related.
  
 
 
0.767
SFQ02367.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 
 
0.762
SFQ68826.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 
 
0.756
SFQ03206.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 
 
0.755
SFQ54162.1
Hint domain-containing protein.
 
   
  0.752
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
Server load: low (24%) [HD]