STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ56018.1Glycosyltransferase, GT2 family. (368 aa)    
Predicted Functional Partners:
SFQ70715.1
UDP-galactopyranose mutase.
 
  
 0.874
SFQ74040.1
Glycosyltransferase, GT2 family.
 
  
 0.805
SFQ70683.1
Glycosyl transferase family 2.
 
  
 0.789
SFQ56006.1
Capsular polysaccharide transport system permease protein.
 
  
 0.718
SFQ74033.1
Hypothetical protein.
 
     0.643
SFQ70694.1
Glycosyl transferase family 2.
 
  
 0.635
SFQ55995.1
Capsular polysaccharide transport system permease protein.
 
     0.634
SFQ56028.1
Lipid A 3-O-deacylase (PagL).
       0.620
SFQ57011.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase.
  
  
 0.553
SFQ71313.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase.
  
  
 0.553
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.