STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ60512.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
SFQ46748.1
Flagellar motility protein MotE, a chaperone for MotC folding.
    
 
 0.829
SFQ60497.1
Manganese-dependent inorganic pyrophosphatase.
       0.600
SFQ60523.1
Chaperonin GroES.
       0.559
SFQ34627.1
Hypothetical protein.
  
     0.542
SFQ58328.1
Hypothetical protein.
  
     0.454
SFQ29884.1
Outer membrane protein, adhesin transport system.
  
     0.447
SFQ60533.1
Chaperonin GroEL.
       0.445
SFQ21134.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Donghicola eburneus
NCBI taxonomy Id: 393278
Other names: D. eburneus, DSM 29127, Donghicola eburneus Yoon et al. 2007, JCM 13604, KCTC 12735, strain SW-277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.